MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus acidominimus
6_8CXCR23O2_S6
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 497
bases: 2,471,173 bps
CDS: 2,088
rRNA: 4
Repeat region:
tmRNA: 1
tRNA: 48
misc RNA:
Total features: 2,141
Total number of protein coding genes annotated/found:
2,088
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5051|JADGLR010000497.1
SEQF5051_02141
Genome Viewer
NA
AA
468/156
1740-1273
hypothetical protein
SEQF5051|JADGLR010000497.1
SEQF5051_02140
Genome Viewer
NA
AA
402/134
1252-851
hypothetical protein
SEQF5051|JADGLR010000497.1
SEQF5051_02139
Genome Viewer
NA
AA
201/67
838-638
hypothetical protein
SEQF5051|JADGLR010000497.1
SEQF5051_02138
Genome Viewer
NA
AA
318/106
627-310
hypothetical protein
SEQF5051|JADGLR010000495.1
SEQF5051_02137
Genome Viewer
NA
AA
285/95
3636-3920
hypothetical protein
SEQF5051|JADGLR010000495.1
SEQF5051_02136
Genome Viewer
NA
AA
1851/617
1781-3631
GTP-binding protein TypA/BipA
SEQF5051|JADGLR010000495.1
SEQF5051_02135
Genome Viewer
NA
AA
867/289
469-1335
Ribosomal RNA small subunit methyltransferase I
SEQF5051|JADGLR010000495.1
SEQF5051_02134
Genome Viewer
NA
AA
318/106
149-466
Initiation-control protein YabA
SEQF5051|JADGLR010000482.1
SEQF5051_02133
Genome Viewer
NA
AA
702/234
4310-3609
putative ABC transporter ATP-binding protein
SEQF5051|JADGLR010000482.1
SEQF5051_02132
Genome Viewer
NA
AA
3363/1121
3599-237
Chromosome partition protein Smc
SEQF5051|JADGLR010000481.1
SEQF5051_02131
Genome Viewer
NA
AA
1104/368
50105-51208
UDP-galactopyranose mutase
SEQF5051|JADGLR010000481.1
SEQF5051_02130
Genome Viewer
NA
AA
609/203
49079-49687
hypothetical protein
SEQF5051|JADGLR010000481.1
SEQF5051_02129
Genome Viewer
NA
AA
504/168
48579-49082
hypothetical protein
SEQF5051|JADGLR010000481.1
SEQF5051_02128
Genome Viewer
NA
AA
138/46
48392-48529
hypothetical protein
SEQF5051|JADGLR010000481.1
SEQF5051_02127
Genome Viewer
NA
AA
2211/737
46204-48414
Anaerobic ribonucleoside-triphosphate reductase
SEQF5051|JADGLR010000481.1
SEQF5051_02126
Genome Viewer
NA
AA
1545/515
44225-45769
hypothetical protein
SEQF5051|JADGLR010000481.1
SEQF5051_02125
Genome Viewer
NA
AA
1245/415
42464-43708
Folylpolyglutamate synthase
SEQF5051|JADGLR010000481.1
SEQF5051_02124
Genome Viewer
NA
AA
912/304
41145-42056
hypothetical protein
SEQF5051|JADGLR010000481.1
SEQF5051_02123
Genome Viewer
NA
AA
549/183
39986-40534
hypothetical protein
SEQF5051|JADGLR010000481.1
SEQF5051_02122
Genome Viewer
NA
AA
288/96
39706-39993
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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